Protein Interaction Analysis Tools
 
 
Proface   ProDface   PRICE   PIASP
     

Analysis of protein-protein Interface

Developed and maintained by Bose Institute, Kolkata

 

Server for the analysis of protein DNA interface

Developed and maintained by Bose Institute, Kolkata

 

Server for the analysis of protein protein interfaces

Developed and maintained by Bose Institute, Kolkata

 

For mining structurally conserved atomic interactions in protein - ligand complexes

Developed and maintained by Birla Institute of Scientific Research

Sanjeevini - Docking tool   PROprint   MHCBN   ProPred
     

A Complete Drug Designing Software Suite

Developed and maintained by Supercomputing Facility For Bioinformatics and Computational Biology, IIT Delhi

 

A webserver for Prediction of physical/functional interaction between two protein molecules.

Developed and maintained by INSTITUTE OF MICROBIAL TECHNOLOGY, CHANDIGARH.

 

A curated database consisting of detailed information about Major Histocompatibility Complex (MHC) Binding,Non-binding peptides and T-cell epitopes.

Developed and maintained by INSTITUTE OF MICROBIAL TECHNOLOGY, CHANDIGARH.

 

A webserver to predict MHC Class-II binding regions in an antigen sequence, using quantitative matrices derived from published literature by Sturniolo et. al., 1999. .

Developed and maintained by INSTITUTE OF MICROBIAL TECHNOLOGY, CHANDIGARH.

HLA-DR4Pred   MHC   MHC2Pred   MHCBENCH
     

TheHLA-DR4Pred is an SVM and ANN based HLA-DRB1*0401(MHC class II alleles) binding peptides prediction method.

Developed and maintained by INSTITUTE OF MICROBIAL TECHNOLOGY, CHANDIGARH.

 

The web based server linked here predict MHC binding regions/motifs in given antigen sequence.

Developed and maintained by INSTITUTE OF MICROBIAL TECHNOLOGY, CHANDIGARH.

 

The MHC4Pred is an SVM based method for prediction of promiscuous MHC class II binding peptides.

Developed and maintained by INSTITUTE OF MICROBIAL TECHNOLOGY, CHANDIGARH.

 

The MHCBench is an interface developed for evaluating the Major Histocompatibility Complex (MHC) binding peptide prediction algorithms.

Developed and maintained by INSTITUTE OF MICROBIAL TECHNOLOGY, CHANDIGARH.

FDR4   IL4pred   ADPint   ATPint
     

This server FDR4 is meant for the prediction of binding affinity of peptide binders in an antigenic sequence for a MHC class II allele HLA-DRB1*0401.

Developed and maintained by INSTITUTE OF MICROBIAL TECHNOLOGY, CHANDIGARH.

 

An In silico platform for designing and disovering of interleukin-4 inducing peptides.

Developed and maintained by INSTITUTE OF MICROBIAL TECHNOLOGY, CHANDIGARH.

 

A webserver for Prediction of ADP interacting residues in a protein.

Developed and maintained by INSTITUTE OF MICROBIAL TECHNOLOGY, CHANDIGARH.

 

A webserver for Identification of ATP binding sites in ATP-binding proteins.

Developed and maintained by INSTITUTE OF MICROBIAL TECHNOLOGY, CHANDIGARH.

DOMprint   GTPbinder   NADbinder   Pprint
     

A webserver for SVM based model for predicting domain-domain interaction (DDI).

Developed and maintained by INSTITUTE OF MICROBIAL TECHNOLOGY, CHANDIGARH.

 

A webserver for Identification of GTP binding residue in protein sequences.

Developed and maintained by INSTITUTE OF MICROBIAL TECHNOLOGY, CHANDIGARH.

 

A webserver for Prediction of NAD binding proteins and their interacting residues.

Developed and maintained by INSTITUTE OF MICROBIAL TECHNOLOGY, CHANDIGARH.

 

ANN based method for identification of RNA-interacting residues in a protein.

Developed and maintained by INSTITUTE OF MICROBIAL TECHNOLOGY, CHANDIGARH.

PreMieR   VitaPred        
         

A webserver for Identification of mannose interacting residues (MIRs) in protein sequences.

Developed and maintained by INSTITUTE OF MICROBIAL TECHNOLOGY, CHANDIGARH.

 

A webserver for Identification of different class of vitamin interacting residues in a protein.

Developed and maintained by INSTITUTE OF MICROBIAL TECHNOLOGY, CHANDIGARH.

       
             
 
     
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